CDS

Accession Number TCMCG007C51444
gbkey CDS
Protein Id XP_009111391.1
Location complement(join(577656..577806,577898..577986,578074..578255,578338..578539,578626..578805,578883..579023,579109..579225,579303..579779))
Gene LOC103836847
GeneID 103836847
Organism Brassica rapa

Protein

Length 512aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009113143.3
Definition heterogeneous nuclear ribonucleoprotein Q isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category A
Description RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13161        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002683        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006109        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009617        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009753        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009895        [VIEW IN EMBL-EBI]
GO:0009909        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010439        [VIEW IN EMBL-EBI]
GO:0010453        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010675        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031056        [VIEW IN EMBL-EBI]
GO:0031060        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031330        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031348        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0034097        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0034341        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042742        [VIEW IN EMBL-EBI]
GO:0042762        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043255        [VIEW IN EMBL-EBI]
GO:0043455        [VIEW IN EMBL-EBI]
GO:0043487        [VIEW IN EMBL-EBI]
GO:0043488        [VIEW IN EMBL-EBI]
GO:0043489        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045595        [VIEW IN EMBL-EBI]
GO:0045824        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048255        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048585        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050777        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061013        [VIEW IN EMBL-EBI]
GO:0061085        [VIEW IN EMBL-EBI]
GO:0062012        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070934        [VIEW IN EMBL-EBI]
GO:0070937        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071204        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071345        [VIEW IN EMBL-EBI]
GO:0071346        [VIEW IN EMBL-EBI]
GO:0071395        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097452        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:1900376        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1902275        [VIEW IN EMBL-EBI]
GO:1902369        [VIEW IN EMBL-EBI]
GO:1902373        [VIEW IN EMBL-EBI]
GO:1902464        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903312        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1905933        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGACGCGCGAGATGTTGACGACCGTGTGGATTTCGAGGAAGGTAGCTACAGTGATATGGAGGATGAAGTGGAGGAGGAGCAAGTAGAGGAGTTTGTGGAAGAAGAGGAAGAAGAAGATGAAGACGATGATGATGATGAAGAAGAAGGTGGTGGCAATCAAGAACGTGAAGTGGAGGATTATGGTGGTGAGAGAAAAGGAGGGGATAGGGAGGAGTTAGCTGAAGATGATGATGATAACCATATTGATATTGAGACGGCTGAAGATGATGATGATAACCATATCGATATCGAGACAGCTGAAGATGAGGAGAAATCATCAGCCTCTCCTATTGATGAAGAAGAAAGGGAGAAGTACTCTCATCTTCTCTCGCTTCCTCCTCATGGCTCTGAAGTGTTCATTGGCGGCTTACCAAGAGATGTTGGAGAAGAGGACTTGAGGGATCTGTGTGAAGCAATAGGAGAGATCTTTGAGGTGAGAGTGATGAAAGATAGGGACTCTGGTGAGAGCAAAGGCTATGCTTTTGTAGGTTTCAGAACCAAAGACGTTGCACAAAAGGCCATTGAGGAGTTGCACAGTAAAGAGTTTAAGGGGAAAACTATAAGGTGCTCCCTTTCTGAAACTAAGAACAGATTGTTTATTGGTAACATCCCAAAGAACTGGACTGAGGATGAGTTTAGGAAAGTCATAGAGGAGGTTGGTCCTGGGGTGGAGAACATCGAGCTCATAAAAGACCCAGCAAACTCCACTCGTAACCGTGGTTTTGCGTTTGTGTTATACTATAACAATGCATGTGCTGACTATTCAAGGCAGAAGATGATTGATTCTAACTTTAAGCTTGAGGGTAACGCTCCAACTGTGACTTGGGCTGACCCCAAAAGCTCTCCTGAGAATTCAGCTGCTGCTGCTCAGGTGAAAGCTCTTTATGTGAAGAACATTCCAGAGAACACCTCAACGGAGCAACTGAAAGAACTCTTTCAGAGGCATGGTGAAGTGACTAAAATCGTCACACCTCCTGGGAAGGGTGGAAAGCGTGACTTTGGGTTCGTCCACTATGCTGAAAGGTCTAGTGCATTGAAGGCTGTCAAAGACTCAGAGAGATATGAAATCAACGGTCAACCGCTAGAAGTTGTGCTTGCTAAACCCCAAGCTGAGAGGAAACATGACTCTTCTTATACTTATGGTGCTGCTGCACCTGCACCTGCTCCCTTTGCGCTTCCTACGTTTGGTGGTTTTGCTGCGCCTGCTTATGGTGCTATGGGTTCTGGTTTGGGCATTGCCGGTAGCTTTAGTCAGCAGCCAATGATCTATGGGAGAGGATCAATGCCAACAGGGATGCAAATGGTTCCAATGCTCCTTCCTGATGGCCGTGTTGGCTATGTTCTGCAGCAGCCTGGTATGCAGATGGCACCACCACCACCACAACGACCCAGAAGAGGTGACCGGAATAATGGCTCAAACAGAGGGTCAGGGCGAGAGAGCAGTGATGATCATGATGGTAGCCGAGGAGGAGGCCGAAGGTACAGGCCCTACTAG
Protein:  
MSDARDVDDRVDFEEGSYSDMEDEVEEEQVEEFVEEEEEEDEDDDDDEEEGGGNQEREVEDYGGERKGGDREELAEDDDDNHIDIETAEDDDDNHIDIETAEDEEKSSASPIDEEEREKYSHLLSLPPHGSEVFIGGLPRDVGEEDLRDLCEAIGEIFEVRVMKDRDSGESKGYAFVGFRTKDVAQKAIEELHSKEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEEVGPGVENIELIKDPANSTRNRGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPENSAAAAQVKALYVKNIPENTSTEQLKELFQRHGEVTKIVTPPGKGGKRDFGFVHYAERSSALKAVKDSERYEINGQPLEVVLAKPQAERKHDSSYTYGAAAPAPAPFALPTFGGFAAPAYGAMGSGLGIAGSFSQQPMIYGRGSMPTGMQMVPMLLPDGRVGYVLQQPGMQMAPPPPQRPRRGDRNNGSNRGSGRESSDDHDGSRGGGRRYRPY